Technical Publications

Improved Automated Localization and Quantification of Protein Multiplexes via Multispectral Fluorescence Imaging in Heterogeneous Biopsy Samples.
Author(s); Sapir M, Khan F, Vengrenyuk Y, Fernandez G, Mesa-Tejada R, Hamann S, Teverovskiy M, Donovan MJ. 2010 Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI).

Cost-minimization Analysis of Biopsy-based Risk Stratification Tools in Intermediate-risk Prostate Cancer Patients. (11.58 KB)
Author(s); Bayer-Zubek V, Konski A. Molecular Diagnosis and Therapy 13(1):31-47 (2009).

Cost Effectiveness of Risk-prediction Tools in Selecting Patients for Immediate Post-prostatectomy Treatment.
Author(s); Bayer-Zubek V, Konski A. Molecular Diagnosis and Therapy 13(1):31-47 (2009).

Robust Tumor Morphometry in Multispectral Fluorescence Microscopy.
Author(s); Tabesh A, Vengrenyuk Y, Teverovskiy M, Khan F, Sapir M, Powell D, Mesa-Tejada R, Donovan MJ, Fernandez G. 2009 Proceedings of SPIE Medical Imaging.

Quantitative Intensity/Area, Semi-automated Controls for Multiplex Immunofluorescence Tissue-based Assays.
Author(s); Hamann S, Vengrenyuk Y, Capodieci P, Teverovskiy M, Mesa-Tejada R. 2009 Experimental Biology Conference.

Support Vector Regression for Censored Data (SVRc): A Novel Tool for Survival Analysis
Khan, Faisal M. and Zubek, Valentina Bayer. Proceedings of the Eighth IEEE International Conference on Data Mining ICDM 2008. pp. 863-868, December 2008.

Automated Localization and Quantification of Protein Multiplexes Via Multi-Spectral Fluorescence Imaging (257.44 KB)
Author(s); Teverovskiy M, Vengrenyuk Y, Tabesh A, Sapir M, Fogarasi S, Pang H, Khan F, Hamann S, Capodieci P, Clayton M, Kim R, Fernandez G, Mesa-Tejada R, Donovan M., ISBI Conference (2008)

Tumor Classification in Histological Images of Prostate Using Color Texture (418.02 KB)
Author(s); Tabesh A and Teverovskiy M., Proc. Asilomar Conf. Signals, Systems, and Computers (2006)

Finding Digest of Rules: Toward Data-Driven Data Mining (74.11 KB)
Author(s); Sapir M and Teverovskiy M., Proceedings of the IASTED International Conference (2006)

Live Logic: Method for Approximate Knowledge Discovery and Decision Making. Rough Sets, Fuzzy Sets, Data Mining, and Granular Computing, 10th International Conference, RSFDGrC (140.16 KB)
Author(s); Sapir M, Verbel D, Kotsianti A, Saidi O., Part I. Lecture Notes in Computer Science 3641: 532-540 (2005)

Gene Expression Profiling within Single Cells in Tissue (457.13 KB)
Author(s); Capodieci P, Donovan M, Buchinsky H, Jeffers Y, Cordon-Cardo C, Gerald W, Edelson J, Shenoy SM, Singer RH., Nature Methods 2:663 (2005)

Censored Time Trees (TM) for Predicting Time to PSA Recurrence (248.74 KB)
Author(s); Zubek VB, Verbel D, Saidi O., Proceedings of the Fourth International Conference on Machine Learning and Applications (2005)

Improved Prediction of Prostate Cancer Recurrence Based on an Automated Tissue Image Analysis System (449.95 KB)
Author(s); Teverovskiy M, Kumar V, Ma J, Kotsianti A, Verbel D, Tabesh A, Pang H, Vengrenyuk Y, Fogarasi S, Saidi O., IEEE International Symposium on Biomedical Imaging: From Nano to Macro Conference Proceedings (2004)

Predicting Prostate Cancer Recurrence via Maximizing the Concordance Index (153.29 KB)
Author(s); Yan L, Verbel D, Saidi O., ACM SIGKDD Conference Proceedings (2004)

Formalization of Induction Logic in Biomedical Research (111.95 KB)
Author; Sapir M., International Symposium on Robotics and Automation (2004)